Package index • smktrans

High level functions

process_country(): Master Process Wrapper
calculate_net_initiation(): Calculate Net Initiation Probabilities (Synthetic Cohort)
write_excel_report(): Write Transition Probability Estimates to Excel
build_web_reports(): Build Web Reports for Pkgdown

Uncertainty & Bootstrapping

run_bootstrap_pipeline(): Run the Master Bootstrap Pipeline
aggregate_uncertainty(): Aggregate Bootstrap Uncertainty (Now includes Median Central Estimate)
generate_bootstrap_sample(): Generate a Single Bootstrap Sample for Complex Survey Data
generate_uncertainty(): Generate Uncertainty Intervals for Transition Probabilities (deprecated)

Smoking trends

ever_smoke(): Summarise and project trends in ever-smoking
trend_fit(): Statistically model trends in smoking status

Smoking initiation

estimate_initiation(): Estimate and Forecast Smoking Initiation
init_est(): Cohort specific smoking initiation
init_adj(): Adjust probabilities of ever-smoking (Holford Method)

Quitting smoking

estimate_quitting(): Estimate and Forecast Smoking Quitting
quit_est(): Estimate smoking quit probabilities (The Flow Equation)
quit_forecast(): Forecast probabilities of smoking initiation, quitting and relapse
smoke_surv(): Estimate age-specific probabilities of death by smoking status
prep_surv(): Estimate socioeconomic differences in cohort survivorship

Relapse to smoking

estimate_relapse(): Estimate and Forecast Smoking Relapse
prep_relapse(): Prepare long-term relapse probabilities
relapse_forecast(): Forecast relapse probabilities (Time-Since-Quit Stratified)

Misc

bin_var(): Bin numeric variable
p_dense(): Convert probabilities of ever-smoking to age-specific probabilities
p_smooth(): Smooth age and period pattern in probability values

Data

hmd_data_eng: Death rates for England & Wales
hmd_data_scot: Death rates for Scotland
hawkins_relapse: Long-term probabilities of smoking relapse